DNA sequence analysis pipeline

• Can start from both bam and fastq files.
• Suitable for whole genome sequencing analysis (as well as exome sequencing analysis).
• Carefully devised mutation filtering steps enables sensitive and accurate somatic mutation detection.
• GenomonSV detects mid-range indels (30bp - 300bp) such as FLT3-ITD as well as long range structural variations.

RNA sequence analysis pipeline

We renovated gene fusion detection (from Genomon-Fusion) to a new approach fusionfusion

• Filtering chimeric read generated by STAR.
• Computationally far more efficient compared to Genomon-Fusion (~200 holds)
• Sensitive even for short read length (~50bp).
• Can easily change to other alignment tools (such as map-splice2, tophat2) by option.
• Integrative analysis with DNA and RNA sequence data (e.g., detecting somatic mutations causing splicing changes) is coming out soon!!

Automatic construction of interactice analysis graphs.

• Graphs are able to be sorted, selected.
• Extract some samples of your interest.